ensembl-hive  2.6
id_mapping.pl File Reference

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Functions

public run_normal ()
 
public run_upload ()
 
public build_scores ()
 
public map ()
 
public assign_stable_ids ()
 
public generate_similarity_events ()
 
public dump_existing_events ()
 
public archive ()
 
public upload_mapping_session_and_events ()
 
public upload_stable_ids ()
 
public upload_archive ()
 
public analyse_results ()
 
public log_cache_stats ()
 

Function Documentation

◆ analyse_results()

public analyse_results ( )

Undocumented method

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◆ archive()

public archive ( )

Undocumented method

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◆ assign_stable_ids()

public assign_stable_ids ( )

Undocumented method

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◆ build_scores()

public build_scores ( )

Undocumented method

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◆ dump_existing_events()

public dump_existing_events ( )

Undocumented method

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◆ generate_similarity_events()

public generate_similarity_events ( )

Undocumented method

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◆ log_cache_stats()

public log_cache_stats ( )

Undocumented method

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◆ map()

public map ( )

Undocumented method

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◆ run_normal()

public run_normal ( )

Undocumented method

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Undocumented method

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◆ run_upload()

public run_upload ( )

Undocumented method

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Undocumented method

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◆ upload_archive()

public upload_archive ( )

Undocumented method

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◆ upload_mapping_session_and_events()

public upload_mapping_session_and_events ( )

Undocumented method

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◆ upload_stable_ids()

public upload_stable_ids ( )

Undocumented method

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Bio::EnsEMBL::IdMapping::InternalIdMapper
Definition: BaseMapper.pm:9
map
public map()
upload_stable_ids
public upload_stable_ids()
dump_existing_events
public dump_existing_events()
log_cache_stats
public log_cache_stats()
run_component
public run_component()
archive
public archive()
Bio::EnsEMBL::IdMapping::BaseObject::new
public $this new()
Bio::EnsEMBL::IdMapping::ResultAnalyser
Definition: ResultAnalyser.pm:38
run_upload
public run_upload()
upload_mapping_session_and_events
public upload_mapping_session_and_events()
generate_similarity_events
public generate_similarity_events()
analyse_results
public analyse_results()
Bio::EnsEMBL::IdMapping::GeneScoreBuilder
Definition: GeneScoreBuilder.pm:18
upload_archive
public upload_archive()
run_normal
public run_normal()
Bio::EnsEMBL::IdMapping::Archiver
Definition: Archiver.pm:39
build_scores
public build_scores()
Bio::EnsEMBL::IdMapping::ExonScoreBuilder
Definition: ExonScoreBuilder.pm:19
assign_stable_ids
public assign_stable_ids()
Bio::EnsEMBL::IdMapping::TranscriptScoreBuilder
Definition: TranscriptScoreBuilder.pm:19