ensembl-hive  2.7.0
Bio::EnsEMBL::Utils::Converter::bio_ens_gene Class Reference
+ Inheritance diagram for Bio::EnsEMBL::Utils::Converter::bio_ens_gene:

Public Member Functions

protected _initialize ()
 
protected _convert_single ()
 
- Public Member Functions inherited from Bio::EnsEMBL::Utils::Converter::bio_ens
public new ()
 
protected _initialize ()
 
protected _guess_module ()
 
public L analysis ()
 
public contig ()
 
public L dbadaptor ()
 
public ensembl_db ()
 
public analysis_dbID ()
 
public analysis_logic_name ()
 
public contig_dbID ()
 
public contig_name ()
 
public L slice_dbID ()
 
public slice_chr_start_end ()
 
public translation_id ()
 
- Public Member Functions inherited from Bio::EnsEMBL::Utils::Converter
public L new ()
 
protected _initialize ()
 
protected _guess_module ()
 
public An convert ()
 
protected _convert_single ()
 
protected _load_module ()
 

Detailed Description

Description

This module is to convert from objects of
Bio::SeqFeature::Gene::GeneStructure to those of Bio::EnsEMBL::Gene

Definition at line 12 of file bio_ens_gene.pm.

Member Function Documentation

◆ _convert_single()

protected Bio::EnsEMBL::Utils::Converter::bio_ens_gene::_convert_single ( )

Undocumented method

Code:
click to view

◆ _initialize()

protected Bio::EnsEMBL::Utils::Converter::bio_ens_gene::_initialize ( )

Undocumented method

Code:
click to view

The documentation for this class was generated from the following file:
Bio::EnsEMBL::Feature::analysis
public Bio::EnsEMBL::Analysis analysis()
Bio::EnsEMBL::Gene
Definition: Gene.pm:37
Bio::EnsEMBL::Utils::Converter
Definition: bio_ens.pm:8
Bio::EnsEMBL::Utils::Converter::bio_ens_gene::_convert_single
protected _convert_single()
Bio::EnsEMBL::Gene::new
public Bio::EnsEMBL::Gene new()
Bio::EnsEMBL::Utils::Converter::bio_ens_gene::_initialize
protected _initialize()