ensembl-hive  2.7.0
Bio::EnsEMBL::Utils::Converter::bio_ens_featurePair Class Reference
+ Inheritance diagram for Bio::EnsEMBL::Utils::Converter::bio_ens_featurePair:

Public Member Functions

protected _initialize ()
 
protected _convert_single ()
 
protected _convert_single_to_featurePair ()
 
protected _convert_single_to_proteinFeature ()
 
protected _convert_single_to_repeatFeature ()
 
protected _create_consensus ()
 
- Public Member Functions inherited from Bio::EnsEMBL::Utils::Converter::bio_ens
public new ()
 
protected _initialize ()
 
protected _guess_module ()
 
public L analysis ()
 
public contig ()
 
public L dbadaptor ()
 
public ensembl_db ()
 
public analysis_dbID ()
 
public analysis_logic_name ()
 
public contig_dbID ()
 
public contig_name ()
 
public L slice_dbID ()
 
public slice_chr_start_end ()
 
public translation_id ()
 
- Public Member Functions inherited from Bio::EnsEMBL::Utils::Converter
public L new ()
 
protected _initialize ()
 
protected _guess_module ()
 
public An convert ()
 
protected _convert_single ()
 
protected _load_module ()
 

Detailed Description

Description

 

Definition at line 13 of file bio_ens_featurePair.pm.

Member Function Documentation

◆ _convert_single()

protected Bio::EnsEMBL::Utils::Converter::bio_ens_featurePair::_convert_single ( )

Undocumented method

Code:
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◆ _convert_single_to_featurePair()

protected Bio::EnsEMBL::Utils::Converter::bio_ens_featurePair::_convert_single_to_featurePair ( )

Undocumented method

Code:
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◆ _convert_single_to_proteinFeature()

protected Bio::EnsEMBL::Utils::Converter::bio_ens_featurePair::_convert_single_to_proteinFeature ( )

Undocumented method

Code:
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◆ _convert_single_to_repeatFeature()

protected Bio::EnsEMBL::Utils::Converter::bio_ens_featurePair::_convert_single_to_repeatFeature ( )

Undocumented method

Code:
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◆ _create_consensus()

protected Bio::EnsEMBL::Utils::Converter::bio_ens_featurePair::_create_consensus ( )

Undocumented method

Code:
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◆ _initialize()

protected Bio::EnsEMBL::Utils::Converter::bio_ens_featurePair::_initialize ( )

Undocumented method

Code:
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The documentation for this class was generated from the following file:
Bio::EnsEMBL::Utils::Converter::bio_ens_featurePair::_convert_single_to_proteinFeature
protected _convert_single_to_proteinFeature()
Bio::EnsEMBL::Utils::Converter::bio_ens_featurePair::_initialize
protected _initialize()
Bio::EnsEMBL::ProteinFeature
Definition: ProteinFeature.pm:24
Bio::EnsEMBL::ProteinFeature::new
public Bio::EnsEMBL::FeaturePair new()
Bio::EnsEMBL::Utils::Converter
Definition: bio_ens.pm:8
Bio::EnsEMBL::Utils::Converter::bio_ens_featurePair::_convert_single
protected _convert_single()
Bio::EnsEMBL::FeaturePair
Definition: FeaturePair.pm:56
Bio::EnsEMBL::RepeatConsensus::name
public String name()
Bio::EnsEMBL::FeaturePair::new
public Bio::EnsEMBL::FeaturePair new()
Bio::EnsEMBL::RepeatFeature
Definition: RepeatFeature.pm:45
Bio::EnsEMBL::Utils::Converter::bio_ens_featurePair::_convert_single_to_featurePair
protected _convert_single_to_featurePair()
Bio::EnsEMBL::Utils::Converter::bio_ens_featurePair::_create_consensus
protected _create_consensus()
Bio::EnsEMBL::RepeatConsensus
Definition: RepeatConsensus.pm:5
Bio::EnsEMBL::Utils::Converter::bio_ens_featurePair::_convert_single_to_repeatFeature
protected _convert_single_to_repeatFeature()
Bio::EnsEMBL::Feature::seqname
public String seqname()