ensembl-hive
2.6
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An Analysis object represents a "stage" of the Hive pipeline that groups together all jobs that share the same module and the same common parameters. Individual Jobs are said to "belong" to an Analysis. Control rules unblock when their condition Analyses are done.
Definition at line 18 of file Analysis.pm.
public Bio::EnsEMBL::Hive::Analysis::analysis_capacity | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::batch_size | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::can_be_empty | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::comment | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::control_rules_collection | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::dataflow | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::dataflow_rules_by_branch | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::dataflow_rules_collection | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::display_name | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::failed_job_tolerance | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::get_compiled_module_name | ( | ) |
Undocumented method
public Listref Bio::EnsEMBL::Hive::Analysis::get_grouped_dataflow_rules | ( | ) |
Args : none Example :
Description: returns a listref of pairs, where the first element is a separate dfr or a funnel, and the second element is a listref of semaphored fan dfrs Returntype : listref
public Bio::EnsEMBL::Hive::Analysis::hive_capacity | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::jobs_collection | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::language | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::logic_name | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::max_retry_count | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::meadow_type | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::module | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::name | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::parameters | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::print_diagram_node | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::priority | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::AnalysisStats Bio::EnsEMBL::Hive::Analysis::stats | ( | ) |
Arg [1] : none Example :
Description: returns either the previously cached AnalysisStats object, or if it is missing - pulls a fresh one from the DB. Returntype : Bio::EnsEMBL::Hive::AnalysisStats object Exceptions : none Caller : general
public Bio::EnsEMBL::Hive::Analysis::status | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::tags | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::toString | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::unikey | ( | ) |
Undocumented method
public Bio::EnsEMBL::Hive::Analysis::url_query_params | ( | ) |
Undocumented method