Bio::EnsEMBL::Mapper::Unit Class Reference

Public Member Functions
public	new ()
public	id ()
public	start ()
public	end ()

Detailed Description

Synopsis

Description

Two regions mapped between different coordinate systems are each
represented by a Bio::EnsEMBL::Mapper::Unit and joined together as a
Bio::EnsEMBL::Mapper::Pair.

Definition at line 15 of file Unit.pm.

Member Function Documentation

end()

public Bio::EnsEMBL::Mapper::Unit::end

(

)

  Arg  1      int $end
          the end coordinate of the mapped
          region which this object represents
  Function    accessor method
  Returntype  int
  Exceptions  none
  Caller      Bio::EnsEMBL::Mapper::Unit
  Status      Stable

Code:

id()

public Bio::EnsEMBL::Mapper::Unit::id

(

)

  Arg  1      int|char $id
          the id of the object (e.g. seq_region_name) which is mapped
  Function    accessor method
  Returntype  int|char
  Exceptions  none
  Caller      Bio::EnsEMBL::Mapper::Unit
  Status      Stable

Code:

new()

public Bio::EnsEMBL::Mapper::Unit::new

(

)

Undocumented method

Code:

start()

public Bio::EnsEMBL::Mapper::Unit::start

(

)

  Arg  1      int $start
          the start coordinate of the mapped
          region which this object represents
  Function    accessor method
  Returntype  int
  Exceptions  none
  Caller      Bio::EnsEMBL::Mapper::Unit
  Status      Stable

Code:

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The documentation for this class was generated from the following file:

• ensembl/modules/Bio/EnsEMBL/Mapper/Unit.pm