Bio::EnsEMBL::Hive::DBSQL::AnalysisAdaptor Class Reference

Inheritance diagram for Bio::EnsEMBL::Hive::DBSQL::AnalysisAdaptor:

Public Member Functions
public	default_table_name ()
public	object_class ()
public	fetch_by_url_query ()
Public Member Functions inherited from Bio::EnsEMBL::Hive::DBSQL::ObjectAdaptor
public	object_class ()
public	slicer ()
public	objectify ()
public	mark_stored ()
public	keys_to_columns ()
public The	refresh ()
Public Member Functions inherited from Bio::EnsEMBL::Hive::DBSQL::BaseAdaptor
public	default_table_name ()
public	default_insertion_method ()
public	default_overflow_limit ()
public	default_input_column_mapping ()
public	do_not_update_columns ()
public	new ()
public	db ()
public	dbc ()
public	prepare ()
public	overflow_limit ()
public	input_column_mapping ()
public	table_name ()
public	insertion_method ()
public	column_set ()
public	primary_key ()
public	updatable_column_list ()
public	autoinc_id ()
protected	_table_info_loader ()
public	count_all ()
public	fetch_all ()
public	primary_key_constraint ()
public	fetch_by_dbID ()
public	remove_all ()
public	remove ()
public	update ()
public	store_or_update_one ()
public	check_object_present_in_db_by_content ()
public	class_specific_execute ()
public	store ()
protected	_multi_column_filter ()
public	DESTROY ()
public	AUTOLOAD ()

Detailed Description

Synopsis

$analysis_adaptor = $db_adaptor->get_AnalysisAdaptor;
 
$analysis_adaptor = $analysis_object->adaptor;

Description

    Module to encapsulate all db access for persistent class Analysis.
    There should be just one such adaptor per application and database connection.

Definition at line 21 of file AnalysisAdaptor.pm.

Member Function Documentation

default_table_name()

public Bio::EnsEMBL::Hive::DBSQL::AnalysisAdaptor::default_table_name

(

)

Undocumented method

Code:

fetch_by_url_query()

public Bio::EnsEMBL::Hive::DBSQL::AnalysisAdaptor::fetch_by_url_query

(

)

    Description: fetches the analysis either by logic_name or by dbID (either coming from the tail of the URL)

Code:

object_class()

public Bio::EnsEMBL::Hive::DBSQL::AnalysisAdaptor::object_class

(

)

Undocumented method

Code:

---

The documentation for this class was generated from the following file:

• modules/Bio/EnsEMBL/Hive/DBSQL/AnalysisAdaptor.pm