Bio::EnsEMBL::DBSQL::SeqRegionSynonymAdaptor Class Reference

Inheritance diagram for Bio::EnsEMBL::DBSQL::SeqRegionSynonymAdaptor:

Public Member Functions
public	get_synonyms ()
public	store ()
protected	_tables ()
protected	_columns ()
protected	_left_join ()
protected	_objs_from_sth ()
protected	_final_clause ()
Public Member Functions inherited from Bio::EnsEMBL::DBSQL::BaseAdaptor
public Bio::EnsEMBL::DBSQL::BaseAdaptor	new ()
public DBI::StatementHandle	prepare ()
public Bio::EnsEMBL::DBSQL::DBAdaptor	db ()
public Bio::EnsEMBL::DBSQL::DBConnection	dbc ()
public Boolean	is_multispecies ()
public Int	species_id ()
protected	_list_dbIDs ()
protected	_straight_join ()
protected	_can_straight_join ()
public Listref	bind_param_generic_fetch ()
protected	_bind_param_generic_fetch ()
public String	generate_in_constraint ()
public Listref	generic_fetch ()
public Int	generic_count ()
protected	_generate_sql ()
public Bio::EnsEMBL::Feature	fetch_by_dbID ()
protected	_uncached_fetch_by_dbID ()
public Listref	fetch_all_by_dbID_list ()
protected	_uncached_fetch_all_by_dbID_list ()
protected ArrayRef	_uncached_fetch_all_by_id_list ()
public	fetch_all ()
public Scalar	last_insert_id ()
public	insert_ignore_clause ()
protected Bio::EnsEMBL::DBSQL::Support::BaseCache	_id_cache ()
protected Boolean	_no_id_cache ()
public Boolean	ignore_cache_override ()
public Int	schema_version ()
protected	_tables ()
protected	_columns ()
protected	_default_where_clause ()
protected	_left_join ()
protected	_final_clause ()
protected	_objs_from_sth ()
protected	_build_id_cache ()
protected	_logic_name_to_constraint ()

Detailed Description

Definition at line 7 of file SeqRegionSynonymAdaptor.pm.

Member Function Documentation

_columns()

protected Bio::EnsEMBL::DBSQL::SeqRegionSynonymAdaptor::_columns

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)

Undocumented method

Code:

_final_clause()

protected Bio::EnsEMBL::DBSQL::SeqRegionSynonymAdaptor::_final_clause

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)

Undocumented method

Code:

_left_join()

protected Bio::EnsEMBL::DBSQL::SeqRegionSynonymAdaptor::_left_join

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)

Undocumented method

Code:

_objs_from_sth()

protected Bio::EnsEMBL::DBSQL::SeqRegionSynonymAdaptor::_objs_from_sth

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)

Undocumented method

Code:

_tables()

protected Bio::EnsEMBL::DBSQL::SeqRegionSynonymAdaptor::_tables

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)

Undocumented method

Code:

get_synonyms()

public Bio::EnsEMBL::DBSQL::SeqRegionSynonymAdaptor::get_synonyms

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)

Undocumented method

Code:

store()

public Bio::EnsEMBL::DBSQL::SeqRegionSynonymAdaptor::store

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)

Undocumented method

Code:

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The documentation for this class was generated from the following file:

• ensembl/modules/Bio/EnsEMBL/DBSQL/SeqRegionSynonymAdaptor.pm