ensembl-hive
2.6
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Public Member Functions | |
public Bio::EnsEMBL::MiscSet | new () |
public String | code () |
public String | name () |
public String | description () |
public Int | longest_feature () |
Public Member Functions inherited from Bio::EnsEMBL::Storable | |
public Bio::EnsEMBL::Storable | new () |
public Instance | new_fast () |
public Int | dbID () |
public Bio::EnsEMBL::DBSQL::BaseAdaptor | adaptor () |
public Boolean | is_stored () |
public | get_all_DAS_Features () |
MiscSets represent classsifications or groupings of MiscFeatures. Features are classified into sets essentially to define what they are and how they may be used. Generally MiscFeatures are retrieved on the basis of their associated sets. See Bio::EnsEMBL::MiscFeature, Bio::EnsEMBL::DBSQL::MiscFeatureAdaptor. Note that MiscSets and MiscFeatures were formerly known as MapSets and MapFrags
Definition at line 31 of file MiscSet.pm.
public String Bio::EnsEMBL::MiscSet::code | ( | ) |
Arg [1] : string $newval (optional) The new value to set the code attribute to Example :
Description: Getter/Setter for the code attribute Returntype : string Exceptions : none Caller : general Status : Stable
public String Bio::EnsEMBL::MiscSet::description | ( | ) |
Arg [1] : string $newval (optional) The new value to set the description attribute to Example :
Description: Getter/Setter for the description attribute Returntype : string Exceptions : none Caller : general Status : Stable
public Int Bio::EnsEMBL::MiscSet::longest_feature | ( | ) |
Arg [1] : int $newval (optional) The new value to set the longest_feature attribute to Example :
Description: Getter/Setter for the longest_feature attribute Returntype : int Exceptions : none Caller : general Status : Stable
public String Bio::EnsEMBL::MiscSet::name | ( | ) |
Arg [1] : string $newval (optional) The new value to set the code attribute to Example :
Description: Getter/Setter for the name attribute Returntype : string Exceptions : none Caller : general Status : Stable
public Bio::EnsEMBL::MiscSet Bio::EnsEMBL::MiscSet::new | ( | ) |
Arg [1] : int $misc_set_id The internal identifier for this misc set Arg [2] : string $code The unique code which identifies this set type Arg [3] : string $name The human readable name of this set Arg [4] : string $desc The description of this set Arg [5] : int $max_len The maximum length of features of this mapset Example :
Description: Instantiates a Bio::EnsEMBL::MiscSet Returntype : Bio::EnsEMBL::MiscSet Exceptions : none Caller : MiscFeatureAdaptor Status : Stable