XrefParser::ZFINDescParser Class Reference

Public Member Functions
public N	run ()

Detailed Description

Description

A parser class to parse the ZFIN file for descriptions.

-species = danio_rerio
-species_id = 7955
-data_uri = ftp://zfin.org/pub/transfer/MEOW/zfin_genes.txt
-file_format = TSV
-columns = [acc desc label ignored ignored]

Synopsis

my $parser = Bio::EnsEMBL::Xref::Parser::ZFINDescParser->new(
  source_id  => 149,
  species_id => 7955,
  files      => ['zfin_genes.txt'],
  xref_dba   => $xref_dba
);
 
$parser->run();

Definition at line 28 of file ZFINDescParser.pm.

Member Function Documentation

run()

public N XrefParser::ZFINDescParser::run

(

)

  Description: Runs the ZFINDescParser
  Return type: N/A
  Caller     : internal
 

Code:

---

The documentation for this class was generated from the following file:

• ensembl/misc-scripts/xref_mapping/XrefParser/ZFINDescParser.pm