XrefParser::WormBaseCuratedSynonymsParser Class Reference

Public Member Functions
public	run ()
public	get_data ()
public	add_xref_and_direct_xref ()

Detailed Description

Description

This parser will read and create dependent xrefs from a simple
tab delimited file.

Synopsis

my $parser = XrefParser::WormBaseCuratedSynonymsParser->new($db->dbh);
$parser->run({
  source_id  => 11,
  species_id => 9606,
  files      => [ "/nfs/production/flicek/wormbase/parasite/data/synonyms/strongyloides_stercoralis_prjeb528/curated_synonyms.tsv" ],
});

Definition at line 22 of file WormBaseCuratedSynonymsParser.pm.

Member Function Documentation

add_xref_and_direct_xref()

public XrefParser::WormBaseCuratedSynonymsParser::add_xref_and_direct_xref

(

)

Undocumented method

Code:

get_data()

public XrefParser::WormBaseCuratedSynonymsParser::get_data

(

)

Undocumented method

Code:

run()

public XrefParser::WormBaseCuratedSynonymsParser::run

(

)

Undocumented method

Code:

---

The documentation for this class was generated from the following file:

• ensembl/misc-scripts/xref_mapping/XrefParser/WormBaseCuratedSynonymsParser.pm