ensembl-hive  2.8.1
Bio::EnsEMBL::Utils::Converter::bio_ens_hit Class Reference
+ Inheritance diagram for Bio::EnsEMBL::Utils::Converter::bio_ens_hit:

Public Member Functions

protected _initialize ()
 
protected _convert_single ()
 
protected _convert_single_hit ()
 
protected _convert_single_hsp ()
 
protected _bio_ens_seqFeature_converter ()
 
- Public Member Functions inherited from Bio::EnsEMBL::Utils::Converter::bio_ens
public new ()
 
protected _initialize ()
 
protected _guess_module ()
 
public L analysis ()
 
public contig ()
 
public L dbadaptor ()
 
public ensembl_db ()
 
public analysis_dbID ()
 
public analysis_logic_name ()
 
public contig_dbID ()
 
public contig_name ()
 
public L slice_dbID ()
 
public slice_chr_start_end ()
 
public translation_id ()
 
- Public Member Functions inherited from Bio::EnsEMBL::Utils::Converter
public L new ()
 
protected _initialize ()
 
protected _guess_module ()
 
public An convert ()
 
protected _convert_single ()
 
protected _load_module ()
 

Detailed Description

Definition at line 10 of file bio_ens_hit.pm.

Member Function Documentation

◆ _bio_ens_seqFeature_converter()

protected Bio::EnsEMBL::Utils::Converter::bio_ens_hit::_bio_ens_seqFeature_converter ( )

Undocumented method

Code:
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◆ _convert_single()

protected Bio::EnsEMBL::Utils::Converter::bio_ens_hit::_convert_single ( )

Undocumented method

Code:
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◆ _convert_single_hit()

protected Bio::EnsEMBL::Utils::Converter::bio_ens_hit::_convert_single_hit ( )

Undocumented method

Code:
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◆ _convert_single_hsp()

protected Bio::EnsEMBL::Utils::Converter::bio_ens_hit::_convert_single_hsp ( )

Undocumented method

Code:
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◆ _initialize()

protected Bio::EnsEMBL::Utils::Converter::bio_ens_hit::_initialize ( )

Undocumented method

Code:
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The documentation for this class was generated from the following file:
Bio::EnsEMBL::DnaPepAlignFeature
Definition: DnaPepAlignFeature.pm:12
Bio::EnsEMBL::Utils::Converter::bio_ens_hit::_initialize
protected _initialize()
Bio::EnsEMBL::Utils::Converter
Definition: bio_ens.pm:8
Bio::EnsEMBL::Utils::Converter::bio_ens_hit::_bio_ens_seqFeature_converter
protected _bio_ens_seqFeature_converter()
Bio::EnsEMBL::Utils::Converter::bio_ens::contig
public contig()
Bio::EnsEMBL::Utils::Converter::bio_ens_hit::_convert_single
protected _convert_single()
Bio::EnsEMBL::DnaDnaAlignFeature
Definition: DnaDnaAlignFeature.pm:15
Bio::EnsEMBL::Utils::Converter::bio_ens_hit::_convert_single_hit
protected _convert_single_hit()
Bio::EnsEMBL::Utils::Converter::bio_ens_hit::_convert_single_hsp
protected _convert_single_hsp()
Bio::EnsEMBL::Utils::Converter::bio_ens::analysis
public L analysis()