Inheritance diagram for Bio::EnsEMBL::IdMapping::TinyTranslation:

Public Member Functions
public Int	transcript_id ()

public String	seq ()

Public Member Functions inherited from Bio::EnsEMBL::IdMapping::TinyFeature
public Bio::EnsEMBL::IdMapping::TinyFeature	new_fast ()

public Int	id ()

public String	stable_id ()

public Int	version ()

public String	created_date ()

public String	modified_date ()

public String	to_string ()

Detailed Description

Synopsis

if ( my $tl = $tr->translation ) {
  my $lightweight_tl =
    Bio::EnsEMBL::IdMapping::TinyTranslation->new_fast( [
      $tl->dbID,          $tl->stable_id,
      $tl->version,       $tl->created_date,
      $tl->modified_date, $tr->dbID,
      $tr->translate->seq,
    ] );
}

Description

This is a lightweight translation object for the stable Id mapping. See
the documentation in TinyFeature for general considerations about its
design.

Definition at line 27 of file TinyTranslation.pm.

Member Function Documentation

◆ seq()

public String Bio::EnsEMBL::IdMapping::TinyTranslation::seq ( )

  Arg[1]      : (optional) String - the translation's sequence
  Description : Getter/setter for the translation's sequence.
  Return type : String
  Exceptions  : none
  Caller      : general
  Status      : At Risk
              : under development

Code:

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◆ transcript_id()

public Int Bio::EnsEMBL::IdMapping::TinyTranslation::transcript_id ( )

  Arg[1]      : (optional) Int - the transcript internal Id ("dbID")
  Description : Getter/setter for the transcript internal Id this translation is
                attached to.
  Return type : Int
  Exceptions  : none
  Caller      : general
  Status      : At Risk
              : under development