Bio::EnsEMBL Class Reference

Classes
class	Hive

Detailed Description

Synopsis

use Bio::EnsEMBL::Registry;
 
Bio::EnsEMBL::Registry->load_registry_from_db(
    -host => 'ensembldb.ensembl.org',
    -user => 'anonymous',
    -db_version => 112,
    -species => 'homo sapiens',
    -group => 'core'
);
my $slice_adaptor = Bio::EnsEMBL::Registry->get_adaptor(
    'homo sapiens', 'Core', 'Slice'
);
my $slice = $slice_adaptor->fetch_by_gene_stable_id('ENSG00000101266');
say $slice->display_id();

Description

Bio::EnsEMBL is the namespace for the EnsEMBL Core API.
The Core API provides access to the EnsEMBL genomic databases.

Most people will want to use Bio::EnsEMBL::Registry as an entry point.

See-also

Lhttps://www.ensembl.org/info/docs/api/index.html

Definition at line 33 of file EnsEMBL.pm.

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The documentation for this class was generated from the following file:

• ensembl/modules/Bio/EnsEMBL.pm