AssemblyMapper::BlastzAligner Member List

This is the complete list of members for AssemblyMapper::BlastzAligner, including all inherited members.

_by_chr_num()	AssemblyMapper::BlastzAligner
adjust_coords()	AssemblyMapper::BlastzAligner
AUTOLOAD()	AssemblyMapper::BlastzAligner
cleanup_tmpfiles()	AssemblyMapper::BlastzAligner
create_tempdir()	AssemblyMapper::BlastzAligner
filter_overlaps()	AssemblyMapper::BlastzAligner
find_best_alignment()	AssemblyMapper::BlastzAligner
found_match()	AssemblyMapper::BlastzAligner
get_stats()	AssemblyMapper::BlastzAligner
init_stats()	AssemblyMapper::BlastzAligner
lav_to_axt()	AssemblyMapper::BlastzAligner
log_block_stats()	AssemblyMapper::BlastzAligner
log_overall_stats()	AssemblyMapper::BlastzAligner
new()	AssemblyMapper::BlastzAligner
parse_blastz_output()	AssemblyMapper::BlastzAligner
remove_tempdir()	AssemblyMapper::BlastzAligner
run_blastz()	AssemblyMapper::BlastzAligner
stats_incr()	AssemblyMapper::BlastzAligner
write_assembly()	AssemblyMapper::BlastzAligner
write_sequence()	AssemblyMapper::BlastzAligner