EnsEMBL.pm

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=pod
 
=encoding UTF-8
 
=head1 LICENSE
 
See the NOTICE file distributed with this work for additional information
regarding copyright ownership.
 
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
You may obtain a copy of the License at
 
     http://www.apache.org/licenses/LICENSE-2.0
 
Unless required by applicable law or agreed to in writing, software
distributed under the License is distributed on an "AS IS" BASIS,
WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
See the License for the specific language governing permissions and
limitations under the License.
 
=cut
 
 
=head1 CONTACT
 
  Please email comments or questions to the public Ensembl
  developers list at <http://lists.ensembl.org/mailman/listinfo/dev>.
 
  Questions may also be sent to the Ensembl help desk at
  <http://www.ensembl.org/Help/Contact>.
 
=cut
 
=head1 NAME
 
Bio::EnsEMBL - API to connect to and work with EnsEMBL genomic databases
 
=head1 SYNOPSIS
 
    use Bio::EnsEMBL::Registry;
 
    Bio::EnsEMBL::Registry->load_registry_from_db(
        -host => 'ensembldb.ensembl.org',
        -user => 'anonymous',
        -db_version => 112,
        -species => 'homo sapiens',
        -group => 'core'
    );
    my $slice_adaptor = Bio::EnsEMBL::Registry->get_adaptor(
        'homo sapiens', 'Core', 'Slice'
    );
    my $slice = $slice_adaptor->fetch_by_gene_stable_id('ENSG00000101266');
    say $slice->display_id();
 
=head1 DESCRIPTION
 
L<Bio::EnsEMBL> is the namespace for the EnsEMBL Core API.
The Core API provides access to the EnsEMBL genomic databases.
 
Most people will want to use L<Bio::EnsEMBL::Registry> as an entry point.
 
=head1 SEE ALSO
 
L<https://www.ensembl.org/info/docs/api/index.html>
 
=head1 SUPPORT
 
Please email comments or questions to the public EnsEMBL developers list at
L<http://lists.ensembl.org/mailman/listinfo/dev>.
 
Questions may also be sent to the EnsEMBL help desk at
L<http://www.ensembl.org/Help/Contact>.
 
=head1 COPYRIGHT AND LICENCE
 
Copyright [1999-2015] Wellcome Trust Sanger Institute and the EMBL-European Bioinformatics Institute
 
Copyright [2016-2024] EMBL-European Bioinformatics Institute
 
Licensed under the Apache License, Version 2.0
 
=cut
 
use strict;
use warnings;
package Bio::EnsEMBL;
# ABSTRACT: API to connect to and work with EnsEMBL genomic databases
 
1;