Presentations & Workshop materials ---------------------------------- We occasionally run workshops to teach how to use eHive, at the EMBL-EBI and in other institutes too. If you are interested in hosting one, please contact the `Ensembl Helpdesk `__. March 2017, Roslin Institute ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ .. Trick: the images have to be available at compilation time and can't have whitespace in their names. The paths must thus be valid from the current directory. However, the targets are not copied over by default. They are only copied over by adding them to html_extra_dir, which changes the path. In 2017 we ran two workshops consecutively: at the NCHC, Hsinchu, Taiwan, and at the Roslin Institute, Edinburgh, United Kingdom. Here are the materials we used at the latter (based on feedback from the first course). The workshop was composed of four parts: 1. Introduction to eHive This part gives an overview of eHive, and explains the basic concepts of workflow management. .. image:: ../presentations/HiveWorkshop_Mar2017/Workshop_introduction.jpg :target: ../HiveWorkshop_Mar2017/Workshop%20introduction.pdf 2. Initialising and running eHive pipelines This part shows how to run already-existing pipelines. .. image:: ../presentations/HiveWorkshop_Mar2017/Run_troubleshoot_tune_pipelines.jpg :target: ../HiveWorkshop_Mar2017/Run%20troubleshoot%20tune%20pipelines.pdf 3. Pipeline configuration This part is about writing new pipelines using available components. .. image:: ../presentations/HiveWorkshop_Mar2017/Creating_pipelines.jpg :target: ../HiveWorkshop_Mar2017/Creating%20pipelines.pdf 4. Writing your own Runnable modules This part is about writing new components (Runnables) to add to pipelines. .. image:: ../presentations/HiveWorkshop_Mar2017/Writing_runnables.jpg :target: ../HiveWorkshop_Mar2017/Writing%20runnables.pdf